Protocol's usage ranking

Here you can see a ranking from the most to the less used scipion protocols.

Rank Protocol Name Times used
1 ProtUserSubSet 3325
2 ProtRelionClassify3D 1681
3 ProtRelionClassify2D 1612
4 ProtCTFFind 1222
5 ProtImportMovies 1188
6 XmippProtExtractParticles 1156
7 ProtRelionRefine3D 1032
8 ProtImportVolumes 1026
9 ProtMotionCorr 994
10 ProtImportParticles 827
11 ProtImportMicrographs 750
12 XmippProtParticlePicking 677
13 LegacyProtocol 620
14 ProtSplitSet 531
15 ProtMonitorSummary 422
16 ProtRelionPostprocess 421
17 ProtSubSet 412
18 XmippParticlePickingAutomatic 376
19 XmippProtCL2D 361
20 ProtRelionExtractParticles 345
21 XmippProtCropResizeVolumes 344
22 XmippProtCropResizeParticles 339
23 ProtGctf 336
24 XmippProtPreprocessMicrographs 293
25 ProtRelionPreprocessParticles 266
26 ProtUnionSet 257
27 EmanProtInitModel 253
28 ProtImportCoordinates 245
29 XmippProtCreateMask3D 217
30 ProtRelion2Autopick 190
31 ProtExtractCoords 189
32 XmippProtCTFMicrographs 153
33 XmippProtRansac 138
34 ProtImportAverages 134
35 EmanProtBoxing 131
36 ProtImportCTF 128
37 XmippProtOFAlignment 123
38 SparxGaussianProtPicking 114
39 XmippProtConvertToPseudoAtoms 114
40 ProtGautomatch 110
41 XmippProtCL2DAlign 107
42 XmippProtFilterVolumes 105
43 ProtStress 101
44 ProtRelionReconstruct 100
45 XmippProtMonoRes 100
46 XmippProtMovieCorr 92
47 XmippProtProjMatch 84
48 ProtLocalizedRecons 83
49 ProtUnblur 79
50 ProtCTFAssign 76
51 ProtImportMask 69
52 XmippProtReconstructHighRes 66
53 ProtRelionExportCtf 62
54 ProtResMap 62
55 XmippProtAlignVolume 62
56 ProtRelionCreateMask3D 60
57 XmippProtExtractUnit 57
58 XmippProtPreprocessVolumes 57
59 AtsasProtConvertPdbToSAXS 56
60 SpiderProtFilter 54
61 ProtLocalizedExtraction 53
62 XmippProtMaskVolumes 52
63 XmippProtPreprocessParticles 52
64 ProtRelionSortParticles 51
65 XmippProtConvertPdb 51
66 XmippProtScreenParticles 51
67 XmippProtReconstructSignificant 49
68 XmippProtMovieGain 48
69 ProtCreateStreamData 46
70 SpiderProtAlignPairwise 45
71 EmanProtRefine 43
72 XmippProtResolution3D 43
73 SpiderProtAlignAPSR 42
74 XmippProtConsensusPicking 42
75 XmippProtExtractMovieParticles 42
76 SpiderProtCAPCA 41
77 ProtImportPdb 40
78 XmippProtML2D 38
79 ProtRelionSubtract 37
80 XmippProtEliminateFalseParticles 36
81 ProtFrealign 35
82 XmippProtFilterParticles 35
83 XmippProtCTFCorrectWiener2D 34
84 XmippProtImageOperateVolumes 34
85 XmippProtVolumeHomogenizer 33
86 SpiderProtClassifyWard 32
87 XmippProtCTFDiscrepancy 32
88 XmippProtCompareReprojections 31
89 SpiderProtClassifyDiday 27
90 ProtEmxExport 26
91 ProtCreateMask 25
92 ProtImportMicrographsTiltPairs 25
93 XmippProtExtractParticlesPairs 25
94 XmippProtMultiRefAlignability 24
95 ProtMonitorSystem 23
96 SpiderProtCustomMask 23
97 ProtSubSetByMic 22
98 ProtMonitorISPyB 21
99 BatchProtNMACluster 20
100 XmippProtNMA 20
101 DogPickerProtPicking 19
102 SpiderProtClassifyKmeans 19
103 ProtFrealignClassify 18
104 SpiderProtRefinement 18
105 XmippProtGpuCrrCL2D 18
106 XmippProtMonoDir 18
107 ProtImportCoordinatesPairs 17
108 XmippProtKerdensom 17
109 XmippProtMLTomo 17
110 XmippProtMovieAverage 17
111 XmippProtReconstructFourier 16
112 XmippProtRotSpectra 16
113 XmippProtCTFSelection 15
114 EmanProtTiltValidate 14
115 ProtAlignmentAssign 14
116 ProtSummovie 14
117 XmippProtAlignmentNMA 14
118 XmippProtMaskParticles 14
119 XmippProtMovieMaxShift 14
120 ProtMagDistCorr 13
121 ProtRelionAutopickFom 13
122 XmippProtCompareAngles 13
123 XmippProtStructureMapping 13
124 XmippProtValidateOverfitting 13
125 ChimeraProtRigidFit 12
126 ProtRelionInitialModel 12
127 XmippProtDimredNMA 12
128 XmippProtSolidAngles 12
129 XmippProtSplitvolume 12
130 XmippProtValidateNonTilt 11
131 PowerfitProtRigidFit 10
132 Prot3DFSC 10
133 ProtCreateFSC 10
134 ProtMagDistEst 10
135 ProtMonitorISPyB_ESRF 10
136 XmippProtApplyAlignment 10
137 XmippProtRotationalSymmetry 10
138 ProtGemPicker 9
139 XmippProtCreateGallery 9
140 XmippProtParticlePickingPairs 9
141 ProtRelionLocalRes 8
142 ProtMagDistCorrCoord 7
143 ProtRelionAutopick 7
144 ProtCryoEF 6
145 ProtMonitorCTF 6
146 ProtRelionExpandSymmetry 6
147 SpiderProtReconstruct 6
148 EmanProtCTFAuto 5
149 EmanProtReconstruct 5
150 ProtPrime 5
151 XmippProtCreateMask2D 5
152 XmippProtPickNoise 5
153 XmippProtSubtractProjection 5
154 ProtEthanPicker 4
155 XmippProtAngBreakSymmetry 4
156 XmippProtAssignmentTiltPair 4
157 XmippProtMultipleFSCs 4
158 ProtRelionPolish 3
159 SpringProtSegmentExam 3
160 XmippProtAddNoiseVolumes 3
161 XmippProtRCT 3
162 XmippProtScreenDeepLearning1 3
163 BsoftProtBlocres 2
164 BsoftProtParticlePicking 2
165 CCP4ProtRunRefmac 2
166 ImagicProtMSA 2
167 ProtSegmentHelices 2
168 XmippProtAddNoiseParticles 2
169 XmippProtImageOperateParticles 2
170 XmippProtVolumeOccupancy 2
171 CCP4ProtCoot 1
172 EmanProtHelixBoxer 1
173 EmanProtLocScale 1
174 EmanProtRefine2D 1
175 ProtAverageFrames 1
176 ProtGctfRefine 1
177 ProtImportFilaments 1
178 ProtLocScale 1
179 ProtMovieAssignGain 1
180 ProtPDFReport 1
181 XmippProtCLTomo 1
182 XmippProtHelicalParameters 1
183 XmippProtHelicalSymmetrize 1
184 XmippProtReconstructSwarm 1